PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009804161.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 272aa    MW: 30743.1 Da    PI: 6.3081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009804161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-182271255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa+a+++a+  l+g
  XP_009804161.1 22 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAQAYDEAACLLRG 71
                    799******.7******99932...36**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.4272279IPR001471AP2/ERF domain
PfamPF008475.2E-132271IPR001471AP2/ERF domain
CDDcd000181.08E-312278No hitNo description
SMARTSM003803.3E-362285IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-192279IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-272280IPR001471AP2/ERF domain
PRINTSPR003677.2E-82334IPR001471AP2/ERF domain
PRINTSPR003677.2E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEQEQVYDST KEWSAKVQKQ RKFVGVRQRP SGKWVAEIKN TTQKIRMWLG TFDTAEEAAQ  60
AYDEAACLLR GSNTRTNFHN HSPVNPALSM KIRNLLNQKK SLNNIKSKTT PTNHTTTTTT  120
ATTSTTVSSC KSSLSVSNSF SFNTDTSGSR SHQETQIFDD AYKPDLSNFM AGFDQMGSSN  180
FDHSSTFSTD FDRIILDEKV GNFQVPKGGV VHEIGNVEDQ IPEFEHMKVE RQISASLYAM  240
NGVNEYWENI HDCNIDAAFW DLPMLYQMFC PS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804161.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A068VAH98e-98A0A068VAH9_COFCA; Uncharacterized protein
STRINGSolyc01g005630.1.13e-93(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20182261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-32related to AP2 11